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Annangi Balasubramanyam

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  • Joined: 2015
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About

Summary

This is Dr. Balasubramanyam Annangi. I did my Ph.D in Genetics in 2010 from Indian Institute of Chemical Technology, Hyderabad India. 

Currently, I am working as a LabEx SERENADE research chair (Assistant professor) at Institut Mondor de Recherche Biomédicale (Inserm U955, Faculté de Médecine, Créteil, France since September 2015 till date.  I work on the research project entitled “Lung fibrotic effects of cerium oxide nanoparticles: Implications of autophagy pathway”.

I did my postdoctoral fellowship at UAB Barcelona, I was instrumental in studying long-term and low dose exposures of cobalt and zinc oxide nanoparticles that induce cellular transformation of mouse embryonic fibroblasts via oxidative stress. I have strong interest in biotechnology, nanobiotechnology, nanoparticle toxicology and nanoparticles physico-chemical characterization using different analytical tools.

My work has been published in 19 peer review journals out of which 16 research papers, 3 reviews and a book chapter.

 

 

 

 

Positions

SERENADE Research Chair - Assistant Prof. Sep 2015 -

Institut Mondor de Recherche BiomédicaleInserm U955, INSERM (French Institute of Health and Medical Research)

Research Activities:

I am involved in understanding the cerium oxide nanoparticles induced lung fibrosis in mice and its underlying mechanisms. In particular, implications of autophagy pathway in cerium oxide nanoparticles induced lung fibrosis in mice are studied in detail. For this, conditional knockout mice with mutations in the autophagy gene Atg5 in the myeloid lineage (Atg5fl/fl LysM-Cre+ mice, (atg5-/-) and their wild type (WT) are used. To assess the fibrotic response in exposed mice lungs, wide variety of biological, histological, and molecular techniques are applied. The data obtained had been presented in national (France) and international conferences as selected oral communications. Manuscript in preparation.

Teaching Activities:

At present as an Assistant Professor, I am involved in teaching of Masters in Advanced Biosciences with class size 25 students at L'Institut Supérieur des BioSciences de Paris (ISBS-Paris) of UPEC. I deal with basic as well as advanced subjects of Nanotoxicology: Basic concepts of Nanotechnology and Nanotoxicology, Importance of characterization of NPs in Nanosafety, Characterization tools, Genotoxicity of NPs, Cellular assays for Nanotoxicology, Mechanisms involved in NPs toxicity, In vivo biology for Nanotoxicology. Core subject: Respiratory Nanotoxicology. As a part of teaching activity as SERENDE research chair (Assistant Professor), the applicant contributed for BioHealth Computing: Safer Nano Design intensive one-week summer school program aimed at Master and PhD students as well as early career scientists and engineers seeking a wide-ranging overview of Nanosafety held at Archamps Technopole (France). The applicant taught advanced subject In vivo Nanotoxicology: ADME, Alternative methods for animal free risk assessment, PBTK and QSAR modelling of NPs at Safer Nano Design 2016 held from 13th to 18th June 2016 at ESI, Archamps Technopole (France). Class size 15 to 20 students.

Postdoctoral Fellow Dec 2012 - Dec 2014

Genetics and Microbiology, Universitat Autònoma de Barcelona

During postdoctoral work at UAB Barcelona, the focus was on cobalt and zinc oxide nanoparticles induced oxidative DNA damage and its relevance in in vitro carcinogenesis. The data revealed CoNPs were carcinogenic at environmentally relevant doses (B. Annangi et al. Nanotoxicology, 2015) whereas ZnONPs were not carcinogenic at similar conditions (B. Annangi et al. Archives of toxicology, 2016).

Senior Research Biologist Jul 2011 - Nov 2012

Daiichi Sankyo Research Center in India

I was associated with new drug discovery program at Daiichi Sankyo Life Sciences Research Center in India (DSIN) from July 2011 to November 2012. My research activities included development of toxicity assays using high content image analysis (Cellomics Toxinsight from Invitrogen) and BD FACS based approaches. During my tenure with DSIN, I have developed, validated and prepared guideline for in vitro micronuclues assay on Toxinsight. As  a part of safety pharmacology, a number of new chemical entities (NCEs) were screened for their safety at genetic level during my work at DSIN. My efforts have been appreciated by the Daiichi Sankyo Group, Japan.

Education

Indian Institute of Chemical Technology, Hyderabad, India. 2006 - 2010

Field of study: Nanotoxicology,
Degree: PhD in Genetics

I have worked on the topic “Genotoxicity investigations of Aluminium oxide nanomaterials of 30 nm and 40 nm” as my PhD title. The study on genotoxicity of Al2O3 30 nm and Al2O3 40 nm showed the potential relationship between the genotoxic effects of Al2O3 NPs and size, dose and time factors. The characterization of Al2O3 30 nm and Al2O3 40 nm using showed spherical morphologies and mean size distribution <100 nm that correlated with the manufacturer specified sizes 30 nm and 40 nm. However, Al2O3 30 nm and Al2O3 40 nm average diameter in solutions revealed agglomeration. This could be possibly due to physico-chemical interactions between the NPs. The acute genotoxicity study revealed a significant increase in the mean micronuclues (MN) in rats’ bone marrow, peripheral blood and liver cells treated with different doses of Al2O3 30 nm and Al2O3 40 nm indicating size and dose dependent genotoxicity at their respective time intervals in comparison to the Al2O3 bulk and control. Similarly, the total chromosomal aberrations (CA) including and excluding gaps in rats’ bone marrow cells at 18 and 24 h elucidated size and dose dependent genotoxicity. Furthermore, the comet assay data in rats’ peripheral blood, spleen and liver cells at respective sampling times showed size, dose and time dependent DNA damages compared with the Al2O3 bulk and control. With the increase in time of exposure, the DNA damage as % tail DNA in all the tissues were significantly reduced probably due to the action of DNA repair system. Al2O3 30 nm and Al2O3 40 nm significantly accumulated in various rats’ tissues, urine compared to the Al2O3 bulk and control may be due to their nanoscale-size after 14 days of acute dose. Taken together, the present findings suggested that Al2O3 NPs were able to cause genotoxic effects in vivo. Based on this study it could be hypothesized that the size and dose of the Al2O3 NPs may be the cause of the significant genotoxicity. Regardless, the Al2O3 NPs were devoid of mutagenicity evaluated against various S. typhimurium strains. Therefore, considering the ever increasing commercial applications of Al2O3 NPs coupled with the scarcity of knowledge on genotoxicity and mutagenicity of Al2O3 NPs, the data reported would be useful in furthering the investigations for safer and proper utilization of NPs (My PhD work has been published in peer-reviewed journals like Mutagenesis, Mutation research, and Toxicology in vitro).

Skills

Experimental techniques acquired during first postdoctoral work at Universitat Autònoma de Barcelona, Spain.

Cell culture Primary, embryonic and tumor cell lines.

Cytotoxicity assays Count cell system like Beckman Coulter ®, MTT and MTS metabolic assays and tests clonogenic assays.

Chronic treatments prolonged exposure to nanoparticles, mutagenic agents in cell culture conditions

Nucleic acids and protein extraction DNA (Qiacube®), RNA(Trizol®), protein (RIPA)

Nucleic acids and protein quantification Nanodrop® (DNA and RNA) Bradford and BSA method (protein)
PCR Conventional qualitative PCR. Detection of amplified products using electrophoresis in agarose gel.
Real-time PCR: LightCycler 480 Roche®: mRNA gene expression studies

Western blotting Evaluation of protein expression in cell lines

Flow cytometry Evaluation of apoptosis, necrosis, micronuclei, quantification of %iROS etc.
Alkaline Comet Assay Measurement of the amount of genotoxic and oxidative DNA damage.
Zymography Evaluation of secreted MMPs (matrix metalloproteinases) MMP-2 and MMP-9.
Soft agar Assessment of cell transformation by checking the anchorage independent growth ability displayed by cells forming colonies in soft agar matrix.

Indirect Soft agar Assessment of tumor promoter effects using conditioned medium of chronically exposed stromal cells for promoting tumor cells growth in agar matrix.

Cell invasion assays Assessment of the cell invasive capacity shown by different cell lines using the Boyden modified chamber strategy.

Nanoparticle characterization NPs size and morphology evaluation using TEM, SEM, and NPs hydrodynamic radius and zeta potential analyses in solutions using Malvern Zetasizer, quantification of NPs ion release in cell culture conditions using ICP-MS technique etc.
Cellular uptake of Nanoparticles Studied using TEM and flow cytometry

Experimental techniques acquired during second postdoctoral work at U955 INSERM/UPEC France.

Primary cultures Isolation of mice lung fibroblasts (bronchial and parenchymal fibroblasts),
Isolation of peritoneal macrophages from mice

Cytotoxicity assays wst-1 cell proliferation assay

Nucleic acids and protein extraction
DNA (Qiacube®), RNA(Trizol®), protein (RIPA)

Nucleic acids and protein quantification

Nanodrop® (DNA and RNA) Bradford and BSA method (protein)
PCR Conventional qualitative PCR. Detection of amplified products using electrophoresis in agarose gel.
Real-time PCR: Applied Biosystems™ QuantStudio® 6 Flex: mRNA gene expression studies

Western blotting Evaluation of protein expression in mice lung tissue
Histopathological studies Lung tissue morphometric analysis using HE staining, PicroSirius red staining for type 1 collagen.
Immunohistochemistry Qualitative and quantitative estimation of lung fibrosis markers such as alpha SMA, type I collagen, type III and IV collagen, TGFbeta1.
Immunocytochemistry Autophagy and lysosomal markers such as ATG5, LC3, Beclin1, p62 LAMP1 and 2 etc. Myofibroblasts differentiation markers such as alpha SMA, vimentin, desmin, CD31 etc.
Confocal and Fluorescent microscopy Autophagosome and lysosomal fusion studies with co-localization of LC3, p62 and LAMP1 markers.
ELISA Estimation of proinflammatory markers IL1beta, TNFalpha, IL18, MCP1 etc. in mice BAL fluid
Animal handling/dosing techniques Mice and rats handling, working knowledge on knockout mice, animal dosing via non-invasive intra-tracheal instillation of NPs, environmental agents and chemicals using High Pressure microsyringe (Aerosolizer) technique, lung tissue formalin fixation method.
GFP-LC3 and ATG5 KO mice Working knowledge on GFP-LC3 and ATG5 KO mice for autophagy characterization

Professional interests

I have strong interests in nanobiotechnology, nanoparticle toxicology and nanoparticles physico-chemical characterization using different analytical tools.

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New opportunities

Open to new opportunities: Yes

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