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Justine Vandendorpe

Justine Vandendorpe

Data Steward at ZB MED - Informationszentrum Lebenswissenschaften

  • Joined: 2019
  • Items posted: 0
  • Profile views: 182

About

Summary

Currently working in the areas of Research Data Management, Open Science and Data Science \& Services. 5 years education in Biology of Organisms and Ecology with emphases on fieldwork and statistics. 5+ years experience in data cleaning, integration and analysis with R and Python.

Positions

Data Steward Oct 2021 -

NFDI4Microbiota, ZB MED - Informationszentrum Lebenswissenschaften

  • Supporting the curation of microbial omics data and associated metadata.
  • Training 500+ life-science researchers in Research Data Management (RDM) and in reproducible data and software practices (Carpentries Instructor).
  • Coordinating the RDM training team (7 people).
  • Contributing to two peer-reviewed publications, the FAIRsFAIR handbook and the NFDI4Microbiota Knowledge Base.
  • Advising researchers on the use of Electronic Lab Notebooks (ELNs) and on writing their Data Management Plan (DMP).
  • Presentations and training at national and international events.
  • Gaining two certificates.

Research Fellow Sep 2019 - Sep 2021

Open Science, ZB MED - Informationszentrum Lebenswissenschaften

  • Participation in the proposal writing and in the management of the National Research Data Infrastructure for Microbiota Research (NFDI4Microbiota).
  • Training of life science researchers in research data management.
  • Participation in the development of a software for finding Electronic Lab Notebooks.
  • Automation of the actualisation of the PUBLISSO Repository Finder.
  • Participation in the creation of the ZB MED COVID-19 Hub.
  • Presentations and lectures at events of the library and during international conferences.
  • Participation in committees and networks related to research data management (e.g. RDA-COVID19).
  • Gaining four certificates.

Freelance Data Analyst (GIS) Jan 2019 - Aug 2019

xarvio™ Digital Farming Solutions

  • Automation of data acquisition, sanity checks, data preparation and data integration of daily weather observations.
  • Comparison of weather observations and forecasts, both visually and using metrics.
  • Comparison of the distribution of weather stations.
  • Assessing the correlation between meteorological and agricultural variables.
  • Computing the distances between weather stations and relevant map features.
  • Raster and soil property data generation.
  • Advising clients based on technical results.
  • Gaining two certifications.

EU Researcher in Computational Evolutionary Biology Sep 2015 - Aug 2018

JLU Giessen

  • Coordinating a three-year research project spanning four continents and whose budget was about 250,000 €.
  • Collecting 64 invertebrate samples in Romania, Azerbaijan, Ukraine, France and Russia.
  • Joining a one-month ornithological expedition on the Yamal Peninsula, where I gave two interviews.
  • Gaining 61 samples from three continents thanks to 16 collaborators.
  • Lab work: 358 microscopic photographies, 17 dissections, 229 DNA isolations, two internal primers designed, 50 PCRs, 50 agarose gel electrophoreses, 114 DNA sequences deposited on GenBank.
  • Data preparation, data integration and data wrangling.
  • Running molecular phylogenetic analysis (e.g., Bayesian Inference).
  • Two-month internship in ecological modelling at the Naturalis Biodiversity Centre (Netherlands).
  • Publishing my data in the UGSB, on the Pontocaspian taxonomic platform and on GenBank.
  • Sharing my findings in two peer-reviewed papers and during six international conferences (two of which I organised).
  • Contributing to an outreach policy plan in collaboration with WWF Ukraine to raise public awareness of the biodiversity demise in the Danube Delta (1,100 leaflets distributed in Romania, Russia and Ukraine).
  • Organising one and attending 13 practical and theoretical trainings in Biology, Geology and Modelling spanning three continents.
  • Being elected to represent 14 other EU researchers.
  • Gaining 18 certifications.
  • Being mentioned in Salomon Kroonenberg's book: 'Kantelpunt - Hoe de grootste binnenzee op aarde zijn biodiversiteit verloor'.

Education

University of Louvain 2013 - 2015

Field of study: Organism Biology and Ecology
Degree: Master of Science

University of Louvain 2009 - 2013

Field of study: Biological Sciences
Degree: Bachelor of Science

Skills

Keywords: Data Analysis , Data Management, Data Visualisation, Latex, Python, R , Shell Programming, Writing

Professional interests

Keywords: Computational Biology, Conservation biology, Data Analysis , Data Management, ecology, Environmental Biology, Marine biology, Research

CV

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Contact details

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